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VEP run statistics

VEP version (API) 84 (84)
Cache/Database /home/bioinfo/.vep/homo_sapiens/84_GRCh37
Species homo_sapiens
Command line options
--cache --force_overwrite --port 3337 -i /home/bioinfo/Escritorio/doritool_pruebas/input/web.rs --symbol --tab --plugin UpDownDistance,10000,5000 --regulatory --plugin NearestGene,limit=1,max_range=1000000 --plugin Condel,/home/bioinfo/.vep/Plugins/config/ -o /home/bioinfo/Escritorio/doritool_pruebas/output/VEP/condeloutput.txt
Start time 2017-06-01 09:04:24
End time 2017-06-01 09:04:32
Run time 8 seconds
Input file (format) /home/bioinfo/Escritorio/doritool_pruebas/input/web.rs (ID)
Output file /home/bioinfo/Escritorio/doritool_pruebas/output/VEP/condeloutput.txt [text]

General statistics

Lines of input read 23
Variants processed 20
Variants remaining after filtering 20
Lines of output written 214
Novel / existing variants -
Overlapped genes 14
Overlapped transcripts 69
Overlapped regulatory features 4

Variant classes

 
 

Consequences (most severe)

 
 

Consequences (all)

 
 

Coding consequences

 
 

Variants by chromosome

 
 

Distribution of variants on chromosome 2

 

Distribution of variants on chromosome 5

 

Distribution of variants on chromosome 7

 

Distribution of variants on chromosome 10

 

Distribution of variants on chromosome 11

 

Distribution of variants on chromosome 20

 

Position in protein